Damned if I can remember correctly anymore the fine points of EAC...
IIRC, versions of EAC up to a point had a bug? different way of calculating? at gap detection which would indeed alter the hash of track02.
I don't really remember in which version this was fixed, but dumps of TOSEC were done using the old versions. Anyone using newer versions would come up with different hash, just like you mention. Since the "error" wasn't involving any data loss, it was decided not to redump everything from scratch.
Not sure which version I was using back then, a little voice in my mind says 0.95 beta 3. I am unable to check anymore since my old dumping computer which still has the relevant programs installed is back home in Greece and I am living in Dubai now. But it might be worth a shot finding and using 0.95 b3.
Or talking with Aral and Cassiel about the possibility of finally redoing some dumps using the latest EAC, I can't make a call for that.
For previous post questions: unofficial is generally handled "as-is". See some of the existing "Unofficial" dats in TOSEC ISO.
As for converting dumps existing in other formats, we have never done this. All dumps in TOSEC had known dumpers and judging from amount of errors I have seen in random dumps from the Net, it is at least a risky business to take any random image and convert it. Totally impossible for discs with CDDA, but even the theoretically simple data-only stuff, sometimes wouldn't convert to an image identical to the verified one. I'd go with "quality-not quantity" approach and just ignore any such stuff.
Redump were quite loose in their acceptance of "dumps" so they ended up with several scene rips in their dats that proved different from a dump done from an actual disc. At least in PS2 dat from what I hear

I have personally found one in the PSP as well.
Ape Academy 2. NoIntro has it marked as a correct dump in their PSP dat, using a Redump "dump". I dumped the same disc, came up with a different result and after getting crazy thinking I made a bad dump it was finally discovered that someone had used a scene rip made with an older tool and submitted it as an actual dump.