Hey Tim2460,
Thanks for reporting that, will take a look and fix if possible/needed. Reports like yours are highly appreciated, if you find anything more just post around 
Edit: sorted! Thanks again.
One of the scripts was outdated. As for the dat, i've no clue on what happened. Last time i checked cmp is not that consistent when generating deprecated dats and uses "" only when the names (sets and roms) have empty spaces. Anyway in these 3 cases there was an empty space so i have no idea how that happened.
Still rebuilding but i haven't find more problems yet...
I may be able to upload set to PD soon.
Got to check if someone can make Tosec ISO old format to EA Format easily.
What iso sets were moved to the EA format yet ?
NeoGeoCD were not on the latest release... I'll try to make patchs from Ripper006 Upload somewhere and my Old format directory.
l8er (and keep the good renaming work ,)